The dash in the folder name shouldn't be any problem. I can't think of anything that would see it as one code wise. How are you configuring your setup? Manually? Or via the online configuration panel? All configuration should be done via the online setup.
The "Entrance" link in the navigation bar is based on your .threads $config['homeurl'] located in your config.inc.php file. Change the "Entrance" links in your navigation templates to what you want them to be.
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